STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_009231Uncharacterized protein. (448 aa)    
Predicted Functional Partners:
C7M84_013018
Cysteine dioxygenase.
     
 0.924
C7M84_013232
Gamma-glutamyltranspeptidase 1.
     
 0.909
C7M84_008824
Putative 2-aminoethanethiol dioxygenase.
     
 0.907
C7M84_000209
Glutamate decarboxylase.
  
  
 
0.904
C7M84_000208
Cysteine sulfinic Acid Decarboxylase.
  
  
 
0.901
C7M84_005942
Uncharacterized protein.
  
  
 
0.901
C7M84_010897
Aspartate aminotransferase.
     
 0.819
C7M84_023507
Aspartate aminotransferase.
     
 0.815
C7M84_006952
C2 domain-containing protein.
     
 0.625
C7M84_006954
Regulating synaptic membrane exocytosis protein 2.
     
 0.625
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.