STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_012133AP complex subunit sigma; Belongs to the adaptor complexes small subunit family. (213 aa)    
Predicted Functional Partners:
C7M84_022542
AP-1 complex subunit gamma.
    
 0.996
C7M84_024422
AP complex subunit beta.
    
 0.994
C7M84_024540
Clathrin coat assembly protein ap-1; Belongs to the adaptor complexes medium subunit family.
    
 0.981
C7M84_014330
Adaptin_N domain-containing protein.
    
 0.916
C7M84_012525
Putative AP-4 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
  
 
 0.903
C7M84_005648
WD repeat and FYVE domain-containing protein 2.
 
      0.895
C7M84_003896
Uncharacterized protein.
   
 
 0.892
C7M84_003895
Cyclin G-associated kinase.
   
 
 0.892
C7M84_010683
AP-1 complex subunit mu-1; Belongs to the adaptor complexes medium subunit family.
    
 0.883
C7M84_005064
Putative AP-3 complex subunit delta-1-like.
    
 0.831
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.