STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_005312Putative methyltransferase-like protein 4; Belongs to the MT-A70-like family. (265 aa)    
Predicted Functional Partners:
C7M84_006337
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
      
 0.667
C7M84_009110
Putative alpha-ketoglutarate-dependent dioxygenase alkB-like 4.
      
 0.665
C7M84_024464
Methyltransferase-like protein 14-like protein; Belongs to the MT-A70-like family.
      
 0.664
C7M84_015069
Putative pre-mRNA-splicing regulator WTAP.
      
 0.664
C7M84_003863
MTS domain-containing protein.
      
 0.640
C7M84_009626
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.580
C7M84_000674
Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3.
      
 0.499
C7M84_018337
Protein virilizer-like protein.
      
 0.465
C7M84_018339
Uncharacterized protein.
      
 0.465
C7M84_017992
Putative methyltransferase-like protein 5 isoform X2.
      
 0.446
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.