STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7M84_024183Hypoxia-inducible factor 1-alpha inhibitor. (339 aa)    
Predicted Functional Partners:
C7M84_000711
Hypoxia inducible factor 1 alpha.
    
 0.956
C7M84_025248
Poly [ADP-ribose] polymerase.
    
 
 0.822
C7M84_008597
BHLH domain-containing protein.
    
 0.585
C7M84_003088
Putative Neuronal PAS domain-containing protein.
    
 0.585
C7M84_002547
Putative vacuolar assembly/sorting protein DID4.
      
 0.552
C7M84_005796
Putative serine/threonine-protein kinase yakA isoform X4.
    
   0.507
C7M84_013914
JmjC domain-containing protein.
   
  
 0.484
C7M84_010946
Von Hippel-Lindau disease tumor suppressor.
   
 
 0.455
C7M84_006846
Von Hippel-Lindau disease tumor suppressor.
   
 
 0.455
C7M84_000042
Putative fat storage-inducing transmembrane protein 2-like.
      
 0.452
Your Current Organism:
Penaeus vannamei
NCBI taxonomy Id: 6689
Other names: Litopenaeus vannamei, P. vannamei, Pacific white shrimp, Penaeus (Litopenaeus) vannamei, Penaeus sp. AT-2008, white Pacific shrimp, white shrimp
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.