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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvrE_5Legionella vir region protein. (218 aa)    
Predicted Functional Partners:
Lwal_0018
Peptidase, S24 family.
  
     0.748
lvrA_1
Legionella vir region protein.
  
     0.563
Lwal_2840
Opacity protein-like surface antigen.
  
     0.558
Lwal_0600
Initiator Replication protein.
  
     0.555
lvrA_2
Legionella vir region protein.
  
     0.535
Lwal_2870
Phage-related integrase.
  
     0.524
Lwal_0282
Protein-tyrosine phosphatase.
  
     0.519
Lwal_1066
Hypothetical protein.
  
     0.515
Lwal_3222
Hypothetical protein.
  
     0.503
Lwal_2944
GNAT family acetyltransferase.
  
     0.483
Your Current Organism:
Legionella waltersii
NCBI taxonomy Id: 66969
Other names: ATCC 51914, CCUG 44924, CIP 104965, DSM 21908, L. waltersii, NCTC 13017, strain 2074-AUS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.