STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP71703.1Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family. (166 aa)    
Predicted Functional Partners:
ANP71704.1
Catalase; Pfam:pfam00199 Catalase; Belongs to the catalase family.
    
 0.948
ANP74697.1
Peptide ABC transporter substrate-binding protein; Pfam:pfam01475 Ferric uptake regulator family; Belongs to the Fur family.
  
   
 0.784
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.662
ANP71702.1
Pfam:pfam01047 MarR family.
  
  
 0.628
ANP72779.1
Glutamate synthase; Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.561
ANP73355.1
Pfam:pfam13380 CoA binding domain.
  
    0.548
ANP73124.1
Hypothetical protein; Pfam:pfam12840 Helix-turn-helix domain.
  
    0.539
ANP73135.1
Putative transcriptional regulator; Pfam:pfam12840 Helix-turn-helix domain.
  
    0.539
ANP73715.1
Dihydrofolate reductase; Pfam:pfam02742 Iron dependent repressor, metal binding and dimerization domain.
  
  
 0.517
ANP71705.1
Hypothetical protein.
       0.495
Your Current Organism:
Cryobacterium arcticum
NCBI taxonomy Id: 670052
Other names: C. arcticum, Cryobacterium arcticum Bajerski et al. 2011, Cryobacterium sp. SK1, DSM 22823, NCCB 100316, strain SK1
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