STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_00731Probable short-chain dehydrogenase. (958 aa)    
Predicted Functional Partners:
PPL_08664
Delta 9 fatty acid desaturase.
    
 0.706
PPL_11305
Delta 9 fatty acid desaturase.
    
 0.706
coxA
Cytochrome c oxidase assembly protein.
   
 0.612
PPL_09856
Cytochrome b5 reductase.
  
 0.588
PPL_01095
2Fe-2S ferredoxin-type domain-containing protein.
   
 0.583
PPL_09118
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.566
PPL_02900
PKS_AT domain-containing protein.
  
 0.551
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.510
PPL_08951
Carrier domain-containing protein.
  
 0.497
PPL_07743
3-hydroxybutyryl-CoA dehydrogenase.
   
 0.488
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.