STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fcsAFatty acyl-CoA synthetase. (687 aa)    
Predicted Functional Partners:
fcsB
Fatty acyl-CoA synthetase.
  
  
 
0.955
ppt1
Palmitoyl-protein thioesterase 1.
     
 0.932
ppt2
Palmitoyl-protein thioesterase 2.
     
 0.932
ppt3
Palmitoyl-protein thioesterase 3.
     
 0.932
PPL_02858
AMP-binding domain-containing protein.
  
  
 
0.929
PPL_01567
GATA-type domain-containing protein.
     
 0.895
PPL_05635
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
    
 0.885
PPL_01211
Lipase; Belongs to the AB hydrolase superfamily. Lipase family.
    
 0.856
mai
Maleylacetoacetate isomerase; Belongs to the GST superfamily.
      
 0.672
4cl1
4-coumarate-CoA ligase.
 
0.623
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.