STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_07229Aldehyde dehydrogenase. (494 aa)    
Predicted Functional Partners:
PPL_07308
Isocitrate lyase.
   
 
 0.951
dhkA
Histidine kinase.
  
 0.911
purD
Phosphoribosylamine-glycine ligase.
  
 
 0.909
PPL_02671
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.876
oatA
Ornithine aminotransferase.
 
 0.866
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
   
 
 0.845
PPL_02430
Pyridoxal phosphate-dependent decarboxylase family protein.
   
 0.834
PPL_03416
Pyrroline-5-carboxylate reductase.
   
 
 0.822
sdhA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
 0.802
ogdh
2-oxoglutarate dehydrogenase.
   
 
 0.796
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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