Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PPL_01636 | PPL_05100 | D3B022 | D3B9F6 | Lyase_1 domain-containing protein. | Phosphoenolpyruvate carboxylase. | 0.422 |
| PPL_01636 | PPL_06193 | D3B022 | D3BCG8 | Lyase_1 domain-containing protein. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.842 |
| PPL_01636 | PPL_07308 | D3B022 | D3BEZ2 | Lyase_1 domain-containing protein. | Isocitrate lyase. | 0.955 |
| PPL_01636 | PPL_08096 | D3B022 | D3BIL7 | Lyase_1 domain-containing protein. | DAO domain-containing protein. | 0.817 |
| PPL_01636 | malA | D3B022 | D3B2T4 | Lyase_1 domain-containing protein. | Malic enzyme. | 0.946 |
| PPL_01636 | ndufv1 | D3B022 | D3BLC0 | Lyase_1 domain-containing protein. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.711 |
| PPL_01636 | tkrA | D3B022 | D3BRT8 | Lyase_1 domain-containing protein. | Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.657 |
| PPL_04282 | PPL_06193 | D3B748 | D3BCG8 | Uncharacterized protein. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.645 |
| PPL_04282 | PPL_08096 | D3B748 | D3BIL7 | Uncharacterized protein. | DAO domain-containing protein. | 0.810 |
| PPL_04282 | PPL_10989 | D3B748 | D3BSM0 | Uncharacterized protein. | GP-PDE domain-containing protein. | 0.999 |
| PPL_04282 | malA | D3B748 | D3B2T4 | Uncharacterized protein. | Malic enzyme. | 0.481 |
| PPL_04282 | tkrA | D3B748 | D3BRT8 | Uncharacterized protein. | Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.412 |
| PPL_05100 | PPL_01636 | D3B9F6 | D3B022 | Phosphoenolpyruvate carboxylase. | Lyase_1 domain-containing protein. | 0.422 |
| PPL_05100 | PPL_06193 | D3B9F6 | D3BCG8 | Phosphoenolpyruvate carboxylase. | Succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and specificity for either ATP or GTP is provided by different beta subunits. | 0.879 |
| PPL_05100 | PPL_07308 | D3B9F6 | D3BEZ2 | Phosphoenolpyruvate carboxylase. | Isocitrate lyase. | 0.971 |
| PPL_05100 | PPL_08096 | D3B9F6 | D3BIL7 | Phosphoenolpyruvate carboxylase. | DAO domain-containing protein. | 0.877 |
| PPL_05100 | fumH | D3B9F6 | D3BB77 | Phosphoenolpyruvate carboxylase. | Fumarate hydratase. | 0.422 |
| PPL_05100 | malA | D3B9F6 | D3B2T4 | Phosphoenolpyruvate carboxylase. | Malic enzyme. | 0.877 |
| PPL_05100 | ndufv1 | D3B9F6 | D3BLC0 | Phosphoenolpyruvate carboxylase. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.733 |
| PPL_05100 | tkrA | D3B9F6 | D3BRT8 | Phosphoenolpyruvate carboxylase. | Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.870 |
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