STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_08665BCNT-C domain-containing protein. (252 aa)    
Predicted Functional Partners:
rvb1
RuvB-like helicase; Belongs to the RuvB family.
   
 
 0.945
PPL_03391
Myb domain-containing protein.
   
 
 0.944
H2AZ
Histone H2A; Belongs to the histone H2A family.
    
 
 0.920
rvb2
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.899
PPL_07351
YL1_C domain-containing protein.
   
 
 0.874
PPL_07968
HIT-type domain-containing protein.
    
 
 0.847
PPL_01048
Uncharacterized protein.
    
 
 0.630
PPL_02201
Myb domain-containing protein.
    
 
 0.630
PPL_03062
Uncharacterized protein.
    
 
 0.630
PPL_08278
Uncharacterized protein.
    
 
 0.630
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.