STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPL_09531Putative prolyl 4-hydroxylase alpha subunit. (461 aa)    
Predicted Functional Partners:
PPL_09271
Histone-lysine N-methyltransferase.
   
 0.686
PPL_00130
PHD zinc finger-containing protein.
    
  0.680
PPL_07386
SET domain-containing protein.
    
  0.680
set1
SET domain-containing protein.
    
  0.680
suvA
Uncharacterized protein.
    
  0.562
PPL_04289
Glycoside hydrolase family 7 protein.
    
  0.562
PPL_00812
PWWP domain-containing protein.
    
 0.534
PPL_04669
PHD zinc finger-containing protein.
    
 0.534
PPL_06336
Putative prolyl 4-hydroxylase alpha subunit.
   
  
 0.484
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.