STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
papAPolyA polymerase. (757 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.998
fip1l1
Cleavage and polyadenylation specificity factor FIP1.
   
 0.998
cpsf1
CPSF domain-containing protein.
    
 0.998
sympk
Symplekin.
   
 0.997
PPL_03045
Uncharacterized protein.
    
 
 0.988
PPL_03866
WD_REPEATS_REGION domain-containing protein.
   
 
 0.987
cstf3
Cleavage stimulation factor subunit 3.
    
 0.984
PPL_02668
Uncharacterized protein.
    
 
 0.980
PPL_07077
Beta-lactamase domain-containing protein.
   
 0.967
cpsf3
Beta-lactamase domain-containing protein.
   
 0.967
Your Current Organism:
Heterostelium album
NCBI taxonomy Id: 670386
Other names: H. album PN500, Heterostelium album PN500, Heterostelium pallidum PN500, Polysphondylium pallidum PN500
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.