STRINGSTRING
VV0043 protein (Vibrio vulnificus) - STRING interaction network
"VV0043" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0043annotation not available (571 aa)    
Predicted Functional Partners:
VV0046
annotation not available (312 aa)
 
  0.871
VV0045
annotation not available (325 aa)
 
  0.848
VV0044
annotation not available (518 aa)
   
  0.815
VV1307
annotation not available (347 aa)
 
  0.722
VV0252
annotation not available (347 aa)
 
  0.720
VV0251
annotation not available (341 aa)
 
 
  0.710
VV1306
annotation not available (340 aa)
 
 
  0.708
VV2736
annotation not available (341 aa)
 
  0.702
VV1388
annotation not available (295 aa)
 
  0.691
VV1389
annotation not available (320 aa)
 
  0.686
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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