STRINGSTRING
VV0046 protein (Vibrio vulnificus) - STRING interaction network
"VV0046" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0046annotation not available (312 aa)    
Predicted Functional Partners:
VV0045
annotation not available (325 aa)
 
  0.982
VV0044
annotation not available (518 aa)
 
  0.963
oppD
annotation not available (323 aa)
 
  0.892
VV1310
annotation not available (288 aa)
 
  0.890
VV0254
annotation not available (289 aa)
 
  0.884
VV0043
annotation not available (571 aa)
 
  0.871
VV1311
annotation not available (276 aa)
 
  0.867
VV0255
annotation not available (279 aa)
 
  0.866
oppF
annotation not available (331 aa)
 
  0.862
oppB
annotation not available (306 aa)
 
  0.860
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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