STRINGSTRING
VV0054 protein (Vibrio vulnificus) - STRING interaction network
"VV0054" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0054annotation not available (444 aa)    
Predicted Functional Partners:
VV0052
annotation not available (190 aa)
 
 
 
  0.950
VVA0989
annotation not available (277 aa)
 
  0.912
VV0053
annotation not available (479 aa)
 
          0.912
fha1
annotation not available (403 aa)
 
 
  0.791
VV0051
annotation not available (522 aa)
              0.757
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (207 aa)
 
 
  0.559
VVA0501
annotation not available (644 aa)
   
 
  0.527
impG
annotation not available (929 aa)
 
        0.519
impK
annotation not available (442 aa)
 
   
  0.513
VV0055
annotation not available (265 aa)
              0.509
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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