Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV0088 | VV0090 | VV93_v1c00780 | VV93_v1c00800 | annotation not available | annotation not available | 0.895 |
VV0088 | dapF | VV93_v1c00780 | VV93_v1c00770 | annotation not available | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan | 0.942 |
VV0088 | xerC | VV93_v1c00780 | VV93_v1c00790 | annotation not available | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids | 0.938 |
VV0090 | VV0088 | VV93_v1c00800 | VV93_v1c00780 | annotation not available | annotation not available | 0.895 |
VV0090 | VV0686 | VV93_v1c00800 | VV93_v1c06260 | annotation not available | annotation not available | 0.906 |
VV0090 | VV0861 | VV93_v1c00800 | VV93_v1c08000 | annotation not available | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate; In the C-terminal section; belongs to the HTP reductase family | 0.960 |
VV0090 | VV0862 | VV93_v1c00800 | VV93_v1c08010 | annotation not available | annotation not available | 0.914 |
VV0090 | VV1729 | VV93_v1c00800 | VV93_v1c16210 | annotation not available | annotation not available | 0.914 |
VV0090 | VVA0228 | VV93_v1c00800 | VV93_v1c32170 | annotation not available | annotation not available | 0.907 |
VV0090 | dapF | VV93_v1c00800 | VV93_v1c00770 | annotation not available | Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan | 0.792 |
VV0090 | fre | VV93_v1c00800 | VV93_v1c28980 | annotation not available | annotation not available | 0.914 |
VV0090 | ribH | VV93_v1c00800 | VV93_v1c08030 | annotation not available | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family | 0.901 |
VV0090 | xerC | VV93_v1c00800 | VV93_v1c00790 | annotation not available | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC-XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids | 0.923 |
VV0686 | VV0090 | VV93_v1c06260 | VV93_v1c00800 | annotation not available | annotation not available | 0.906 |
VV0686 | VV0861 | VV93_v1c06260 | VV93_v1c08000 | annotation not available | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate; In the C-terminal section; belongs to the HTP reductase family | 0.888 |
VV0686 | VV0862 | VV93_v1c06260 | VV93_v1c08010 | annotation not available | annotation not available | 0.934 |
VV0686 | VV1729 | VV93_v1c06260 | VV93_v1c16210 | annotation not available | annotation not available | 0.934 |
VV0686 | VVA0228 | VV93_v1c06260 | VV93_v1c32170 | annotation not available | annotation not available | 0.904 |
VV0686 | fre | VV93_v1c06260 | VV93_v1c28980 | annotation not available | annotation not available | 0.906 |
VV0686 | ribH | VV93_v1c06260 | VV93_v1c08030 | annotation not available | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family | 0.503 |
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