STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
Node Content
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0095
annotation not available (276 aa)
Predicted Functional Partners:
VV0096
annotation not available
0.804
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1
node2
node1 accession
node2 accession
node1 annotation
node2 annotation
score
VV0095
VV0096
VV93_v1c00850
VV93_v1c00860
annotation not available
annotation not available
0.804
VV0095
VVA1227
VV93_v1c00850
VV93_v1c41520
annotation not available
annotation not available
0.419
VV0095
astE
VV93_v1c00850
VV93_v1c13890
annotation not available
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
0.518
VV0095
rhtB
VV93_v1c00850
VV93_v1c00870
annotation not available
annotation not available
0.483
VV0096
VV0095
VV93_v1c00860
VV93_v1c00850
annotation not available
annotation not available
0.804
VV0096
rhtB
VV93_v1c00860
VV93_v1c00870
annotation not available
annotation not available
0.612
VVA1227
VV0095
VV93_v1c41520
VV93_v1c00850
annotation not available
annotation not available
0.419
astE
VV0095
VV93_v1c13890
VV93_v1c00850
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily
annotation not available
0.518
rhtB
VV0095
VV93_v1c00870
VV93_v1c00850
annotation not available
annotation not available
0.483
rhtB
VV0096
VV93_v1c00870
VV93_v1c00860
annotation not available
annotation not available
0.612
Network Stats
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Functional enrichments in your networkNote: some enrichments may be expected here (why?) explain columns
Enrichment analysis is still ongoing, please wait ...
Statistical background
For the above enrichment analysis, the following statistical background is assumed: