STRINGSTRING
rhtB protein (Vibrio vulnificus) - STRING interaction network
"rhtB" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhtBannotation not available (205 aa)    
Predicted Functional Partners:
VV0098
annotation not available (407 aa)
              0.668
VV0096
annotation not available (332 aa)
              0.612
nhaA
Na(+)/H(+) antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (389 aa)
           
  0.578
dctM
annotation not available (453 aa)
           
  0.553
dctQ
annotation not available (221 aa)
           
  0.553
dnaK
Chaperone protein DnaK; Acts as a chaperone (636 aa)
           
  0.553
phoR
annotation not available (432 aa)
           
  0.552
VV0095
annotation not available (276 aa)
              0.483
VV0099
annotation not available (111 aa)
              0.455
VV2855
annotation not available (206 aa)
   
   
  0.449
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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