STRINGSTRING
VV0104 protein (Vibrio vulnificus) - STRING interaction network
"VV0104" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0104annotation not available (109 aa)    
Predicted Functional Partners:
VV0105
annotation not available (122 aa)
 
          0.882
VV2565
annotation not available (97 aa)
   
          0.781
VV0998
annotation not available (172 aa)
   
          0.780
VV1443
annotation not available (170 aa)
   
          0.776
VV2948
annotation not available (106 aa)
   
          0.765
VVA0725
annotation not available (167 aa)
   
          0.764
VV0110
annotation not available (88 aa)
   
          0.759
VV2266
annotation not available (161 aa)
   
          0.758
VVA0676
annotation not available (118 aa)
   
          0.757
VV2495
annotation not available (127 aa)
   
          0.756
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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