STRINGSTRING
VV0108 protein (Vibrio vulnificus) - STRING interaction network
"VV0108" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0108annotation not available (73 aa)    
Predicted Functional Partners:
VV0107
annotation not available (206 aa)
              0.614
VV2939
annotation not available (165 aa)
   
          0.569
VV1697
annotation not available (142 aa)
   
          0.543
VV2948
annotation not available (106 aa)
   
          0.529
VVA0676
annotation not available (118 aa)
   
          0.519
VVA0684
annotation not available (152 aa)
   
          0.515
VV2935
annotation not available (1421 aa)
   
          0.478
AIL71736.1
annotation not available (229 aa)
   
          0.475
VV2936
annotation not available (138 aa)
   
          0.473
VV0109
annotation not available (197 aa)
              0.473
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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