Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIL69354.1 | AIL69355.1 | VV93_v1c02550 | VV93_v1c02560 | annotation not available | annotation not available | 0.826 |
| AIL69354.1 | AIL69358.1 | VV93_v1c02550 | VV93_v1c02590 | annotation not available | annotation not available | 0.562 |
| AIL69354.1 | traD | VV93_v1c02550 | VV93_v1c02570 | annotation not available | annotation not available | 0.826 |
| AIL69354.1 | traI | VV93_v1c02550 | VV93_v1c02580 | annotation not available | annotation not available | 0.826 |
| AIL69355.1 | AIL69354.1 | VV93_v1c02560 | VV93_v1c02550 | annotation not available | annotation not available | 0.826 |
| AIL69355.1 | AIL69358.1 | VV93_v1c02560 | VV93_v1c02590 | annotation not available | annotation not available | 0.574 |
| AIL69355.1 | traD | VV93_v1c02560 | VV93_v1c02570 | annotation not available | annotation not available | 0.845 |
| AIL69355.1 | traI | VV93_v1c02560 | VV93_v1c02580 | annotation not available | annotation not available | 0.845 |
| AIL69358.1 | AIL69354.1 | VV93_v1c02590 | VV93_v1c02550 | annotation not available | annotation not available | 0.562 |
| AIL69358.1 | AIL69355.1 | VV93_v1c02590 | VV93_v1c02560 | annotation not available | annotation not available | 0.574 |
| AIL69358.1 | traD | VV93_v1c02590 | VV93_v1c02570 | annotation not available | annotation not available | 0.574 |
| AIL69358.1 | traI | VV93_v1c02590 | VV93_v1c02580 | annotation not available | annotation not available | 0.574 |
| AIL71035.1 | dnaN | VV93_v1c19570 | VV93_v1c00020 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.551 |
| AIL71035.1 | polA | VV93_v1c19570 | VV93_v1c01730 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.898 |
| AIL71035.1 | recA | VV93_v1c19570 | VV93_v1c25160 | annotation not available | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.805 |
| AIL71035.1 | traI | VV93_v1c19570 | VV93_v1c02580 | annotation not available | annotation not available | 0.670 |
| dnaN | AIL71035.1 | VV93_v1c00020 | VV93_v1c19570 | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | annotation not available | 0.551 |
| dnaN | polA | VV93_v1c00020 | VV93_v1c01730 | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity | 0.967 |
| dnaN | recA | VV93_v1c00020 | VV93_v1c25160 | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.798 |
| dnaN | traI | VV93_v1c00020 | VV93_v1c02580 | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3’-5’ exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | annotation not available | 0.593 |
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