Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69193.1 | AIL72345.1 | VV93_v1c00910 | VV93_v1c32810 | Protein-tyrosine phosphatase. | AnkB protein. | 0.642 |
AIL69193.1 | apaH | VV93_v1c00910 | VV93_v1c04430 | Protein-tyrosine phosphatase. | Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.601 |
AIL69193.1 | kdkA | VV93_v1c00910 | VV93_v1c02880 | Protein-tyrosine phosphatase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.903 |
AIL69383.1 | kdkA | VV93_v1c02840 | VV93_v1c02880 | ADP-heptose--LPS heptosyltransferase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.775 |
AIL69385.1 | AIL69388.1 | VV93_v1c02860 | VV93_v1c02890 | ADP-heptose--LPS heptosyltransferase. | Hydrolase. | 0.581 |
AIL69385.1 | AIL69409.1 | VV93_v1c02860 | VV93_v1c03100 | ADP-heptose--LPS heptosyltransferase. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.785 |
AIL69385.1 | kdkA | VV93_v1c02860 | VV93_v1c02880 | ADP-heptose--LPS heptosyltransferase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.953 |
AIL69388.1 | AIL69385.1 | VV93_v1c02890 | VV93_v1c02860 | Hydrolase. | ADP-heptose--LPS heptosyltransferase. | 0.581 |
AIL69388.1 | kdkA | VV93_v1c02890 | VV93_v1c02880 | Hydrolase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.756 |
AIL69409.1 | AIL69385.1 | VV93_v1c03100 | VV93_v1c02860 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | ADP-heptose--LPS heptosyltransferase. | 0.785 |
AIL69409.1 | kdkA | VV93_v1c03100 | VV93_v1c02880 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.990 |
AIL72345.1 | AIL69193.1 | VV93_v1c32810 | VV93_v1c00910 | AnkB protein. | Protein-tyrosine phosphatase. | 0.642 |
AIL72345.1 | AIL72988.1 | VV93_v1c32810 | VV93_v1c39320 | AnkB protein. | Phosphoprotein phosphatase. | 0.546 |
AIL72345.1 | apaH | VV93_v1c32810 | VV93_v1c04430 | AnkB protein. | Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.962 |
AIL72345.1 | htpG | VV93_v1c32810 | VV93_v1c09250 | AnkB protein. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.643 |
AIL72345.1 | kdkA | VV93_v1c32810 | VV93_v1c02880 | AnkB protein. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.925 |
AIL72345.1 | udk | VV93_v1c32810 | VV93_v1c11790 | AnkB protein. | Uridine kinase. | 0.425 |
AIL72988.1 | AIL72345.1 | VV93_v1c39320 | VV93_v1c32810 | Phosphoprotein phosphatase. | AnkB protein. | 0.546 |
AIL72988.1 | apaH | VV93_v1c39320 | VV93_v1c04430 | Phosphoprotein phosphatase. | Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.561 |
AIL72988.1 | kdkA | VV93_v1c39320 | VV93_v1c02880 | Phosphoprotein phosphatase. | 3-deoxy-D-manno-octulosonic-acid kinase; Catalyzes the ATP-dependent phosphorylation of the 3-deoxy-D- manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position; Belongs to the protein kinase superfamily. KdkA/RfaP family. | 0.841 |
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