STRINGSTRING
VV0330 protein (Vibrio vulnificus) - STRING interaction network
"VV0330" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0330annotation not available (243 aa)    
Predicted Functional Partners:
VV0329
annotation not available (265 aa)
 
   
  0.986
VV0328
annotation not available (749 aa)
 
   
  0.980
AIL69416.1
annotation not available (139 aa)
              0.742
VV0337
annotation not available (410 aa)
 
   
  0.629
VVA0431
annotation not available (141 aa)
   
     
  0.522
rfaD
ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose (313 aa)
              0.494
VV0463
annotation not available (145 aa)
           
  0.453
VV0075
annotation not available (141 aa)
           
  0.453
AIL69417.1
annotation not available (145 aa)
              0.415
VV0339
annotation not available (146 aa)
 
   
  0.408
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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