Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VV0445 | VV0449 | VV93_v1c04130 | VV93_v1c04170 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.744 |
| VV0445 | VV0452 | VV93_v1c04130 | VV93_v1c04200 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC; Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family | 0.733 |
| VV0445 | VV0453 | VV93_v1c04130 | VV93_v1c04210 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.774 |
| VV0445 | VV0454 | VV93_v1c04130 | VV93_v1c04220 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.616 |
| VV0445 | lptA | VV93_v1c04130 | VV93_v1c04180 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm | 0.838 |
| VV0445 | lptC | VV93_v1c04130 | VV93_v1c04190 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | Lipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA; Belongs to the LptC family | 0.750 |
| VV0445 | ptsN | VV93_v1c04130 | VV93_v1c04140 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.945 |
| VV0445 | ptsO | VV93_v1c04130 | VV93_v1c04120 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.901 |
| VV0445 | rpoN | VV93_v1c04130 | VV93_v1c04160 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.882 |
| VV0445 | yhbH | VV93_v1c04130 | VV93_v1c04150 | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | annotation not available | 0.938 |
| VV0449 | VV0445 | VV93_v1c04170 | VV93_v1c04130 | annotation not available | Nucleotide-binding protein VV0445; Displays ATPase and GTPase activities | 0.744 |
| VV0449 | VV0452 | VV93_v1c04170 | VV93_v1c04200 | annotation not available | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC; Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family | 0.941 |
| VV0449 | VV0453 | VV93_v1c04170 | VV93_v1c04210 | annotation not available | annotation not available | 0.955 |
| VV0449 | VV0454 | VV93_v1c04170 | VV93_v1c04220 | annotation not available | annotation not available | 0.830 |
| VV0449 | lptA | VV93_v1c04170 | VV93_v1c04180 | annotation not available | Lipopolysaccharide export system protein LptA; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm | 0.971 |
| VV0449 | lptC | VV93_v1c04170 | VV93_v1c04190 | annotation not available | Lipopolysaccharide export system protein LptC; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA; Belongs to the LptC family | 0.972 |
| VV0449 | ptsN | VV93_v1c04170 | VV93_v1c04140 | annotation not available | annotation not available | 0.776 |
| VV0449 | ptsO | VV93_v1c04170 | VV93_v1c04120 | annotation not available | annotation not available | 0.729 |
| VV0449 | rpoN | VV93_v1c04170 | VV93_v1c04160 | annotation not available | RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released | 0.813 |
| VV0449 | yhbH | VV93_v1c04170 | VV93_v1c04150 | annotation not available | annotation not available | 0.771 |
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