Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV0495 | VV3240 | VV93_v1c04610 | VV93_v1c29620 | annotation not available | annotation not available | 0.817 |
VV0495 | ilvD | VV93_v1c04610 | VV93_v1c29650 | annotation not available | annotation not available | 0.951 |
VV0495 | ilvE | VV93_v1c04610 | VV93_v1c29640 | annotation not available | Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family | 0.572 |
VV0495 | leuA | VV93_v1c04610 | VV93_v1c04550 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily | 0.941 |
VV0495 | leuB | VV93_v1c04610 | VV93_v1c04540 | annotation not available | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate; Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily | 0.987 |
VV0495 | leuC | VV93_v1c04610 | VV93_v1c04530 | annotation not available | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate | 0.795 |
VV0495 | leuD | VV93_v1c04610 | VV93_v1c04520 | annotation not available | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the LeuD family. LeuD type 1 subfamily | 0.791 |
VV1175 | leuA | VV93_v1c10950 | VV93_v1c04550 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily | 0.925 |
VV3240 | VV0495 | VV93_v1c29620 | VV93_v1c04610 | annotation not available | annotation not available | 0.817 |
VV3240 | ilvD | VV93_v1c29620 | VV93_v1c29650 | annotation not available | annotation not available | 0.989 |
VV3240 | ilvE | VV93_v1c29620 | VV93_v1c29640 | annotation not available | Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family | 0.924 |
VV3240 | leuA | VV93_v1c29620 | VV93_v1c04550 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily | 0.952 |
VV3240 | leuB | VV93_v1c29620 | VV93_v1c04540 | annotation not available | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate; Belongs to the isocitrate and isopropylmalate dehydrogenases family. LeuB type 1 subfamily | 0.987 |
VV3240 | leuC | VV93_v1c29620 | VV93_v1c04530 | annotation not available | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate | 0.794 |
VV3240 | leuD | VV93_v1c29620 | VV93_v1c04520 | annotation not available | 3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate; Belongs to the LeuD family. LeuD type 1 subfamily | 0.769 |
alaA | avtA | VV93_v1c10350 | VV93_v1c00070 | annotation not available | annotation not available | 0.841 |
alaA | ilvD | VV93_v1c10350 | VV93_v1c29650 | annotation not available | annotation not available | 0.915 |
alaA | ilvE | VV93_v1c10350 | VV93_v1c29640 | annotation not available | Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family | 0.847 |
alaA | leuA | VV93_v1c10350 | VV93_v1c04550 | annotation not available | 2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily | 0.919 |
avtA | alaA | VV93_v1c00070 | VV93_v1c10350 | annotation not available | annotation not available | 0.841 |
page 1 of 4