STRINGSTRING
leuO protein (Vibrio vulnificus) - STRING interaction network
"leuO" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
leuOannotation not available (319 aa)    
Predicted Functional Partners:
VV0999
annotation not available (290 aa)
   
     
  0.644
ompU
annotation not available (340 aa)
   
     
  0.631
AIL72846.1
annotation not available (116 aa)
           
  0.555
ybeY
Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3’ terminus of the 16S rRNA (154 aa)
     
   
  0.554
VV0494
annotation not available (601 aa)
            0.551
VV3245
annotation not available (306 aa)
   
          0.504
rpoS
annotation not available (330 aa)
           
  0.452
VVA0945
annotation not available (654 aa)
           
  0.447
AIL73441.1
annotation not available (333 aa)
           
  0.446
VV1413
annotation not available (148 aa)
   
          0.421
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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