STRINGSTRING
VV0644 protein (Vibrio vulnificus) - STRING interaction network
"VV0644" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0644annotation not available (780 aa)    
Predicted Functional Partners:
VV0646
annotation not available (238 aa)
 
  0.968
VV1726
annotation not available (345 aa)
 
 
  0.914
VVA0648
annotation not available (588 aa)
 
  0.903
VV2733
annotation not available (1129 aa)
 
 
0.898
VVA1682
annotation not available (558 aa)
   
 
  0.894
VVA0933
annotation not available (1370 aa)
   
 
0.888
VV2461
annotation not available (715 aa)
   
 
  0.855
VVA0575
annotation not available (319 aa)
   
 
  0.848
VVA0429
annotation not available (307 aa)
   
 
  0.848
VV1291
annotation not available (313 aa)
   
 
  0.848
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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