STRINGSTRING
VV0646 protein (Vibrio vulnificus) - STRING interaction network
"VV0646" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0646annotation not available (238 aa)    
Predicted Functional Partners:
VV0644
annotation not available (780 aa)
 
  0.968
phoR
annotation not available (432 aa)
 
  0.694
cpxA
annotation not available (462 aa)
 
  0.663
metJ
Met repressor; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family (105 aa)
   
          0.646
envZ
annotation not available (432 aa)
 
 
  0.643
VVA1472
annotation not available (1328 aa)
 
 
0.612
VVA1246
annotation not available (466 aa)
 
 
      0.609
VVA0647
annotation not available (1223 aa)
 
 
  0.589
VVA1229
annotation not available (881 aa)
 
 
  0.587
luxQ
Autoinducer 2 sensor kinase/phosphatase LuxQ; At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to LuxU, and ultimately to LuxO. At high cell density, in the presence of autoinducer, the kinase activity is inactivated, and the response regulator domain has a phosphatase activity (By similarity) (857 aa)
 
 
  0.582
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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