STRINGSTRING
tyrA protein (Vibrio vulnificus) - STRING interaction network
"tyrA" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyrAannotation not available (375 aa)    
Predicted Functional Partners:
VV0709
annotation not available (392 aa)
  0.996
hisC
annotation not available (346 aa)
 
  0.986
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system (361 aa)
   
  0.980
VV1221
annotation not available (521 aa)
 
 
  0.971
VV1220
annotation not available (192 aa)
 
 
  0.967
VVA0892
annotation not available (395 aa)
       
  0.950
VV2096
annotation not available (396 aa)
       
  0.950
VV0701
annotation not available (356 aa)
 
 
  0.931
VV3055
annotation not available (192 aa)
   
 
  0.925
VV2080
annotation not available (466 aa)
   
 
  0.924
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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