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trpR protein (Vibrio vulnificus) - STRING interaction network
"trpR" - Trp operon repressor homolog in Vibrio vulnificus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trpRTrp operon repressor homolog; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription (102 aa)    
Predicted Functional Partners:
VV0706
annotation not available (648 aa)
 
     
  0.889
trpCF
annotation not available (475 aa)
         
  0.795
VV1045
annotation not available (198 aa)
   
          0.747
VV1446
annotation not available (193 aa)
   
          0.615
VVA0271
annotation not available (118 aa)
   
          0.612
matP
Macrodomain Ter protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain (149 aa)
   
          0.577
VV2594
annotation not available (189 aa)
   
          0.532
VV2535
annotation not available (284 aa)
   
        0.521
VV1965
annotation not available (258 aa)
   
          0.487
VV2306
annotation not available (197 aa)
   
          0.481
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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