STRINGSTRING
VV0740 protein (Vibrio vulnificus) - STRING interaction network
"VV0740" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0740annotation not available (301 aa)    
Predicted Functional Partners:
VV0739
annotation not available (202 aa)
         
  0.633
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (459 aa)
       
 
  0.556
VVA0204
annotation not available (290 aa)
   
          0.514
VVA0294
Catalase; Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Belongs to the catalase family (514 aa)
         
  0.475
katG
Catalase-peroxidase; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily (723 aa)
         
  0.468
VVA1425
annotation not available (155 aa)
       
 
  0.461
VVA1564
annotation not available (311 aa)
   
     
  0.461
VV0878
annotation not available (307 aa)
   
     
  0.453
VVA1008
annotation not available (292 aa)
   
          0.435
VVA1234
annotation not available (290 aa)
   
          0.431
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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