STRINGSTRING
pepB protein (Vibrio vulnificus) - STRING interaction network
"pepB" - Peptidase B in Vibrio vulnificus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepBPeptidase B; Probably plays an important role in intracellular peptide degradation (432 aa)    
Predicted Functional Partners:
VVA0031
annotation not available (346 aa)
   
 
    0.903
VV2868
annotation not available (317 aa)
   
 
    0.903
gshA
annotation not available (525 aa)
     
 
    0.900
pepN
annotation not available (869 aa)
   
 
  0.861
pepA
Probable cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (502 aa)
   
 
0.854
VVA0892
annotation not available (395 aa)
   
  0.843
VV0852
annotation not available (490 aa)
     
  0.827
VV1133
annotation not available (361 aa)
     
 
  0.808
cysK
annotation not available (322 aa)
     
 
  0.808
glyA2
Serine hydroxymethyltransferase 2; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (431 aa)
   
 
  0.807
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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