Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV0765 | VV0768 | VV93_v1c07110 | VV93_v1c07140 | annotation not available | annotation not available | 0.770 |
VV0765 | bamB | VV93_v1c07110 | VV93_v1c07150 | annotation not available | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.772 |
VV0765 | engA | VV93_v1c07110 | VV93_v1c07160 | annotation not available | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | 0.513 |
VV0765 | hisS | VV93_v1c07110 | VV93_v1c07130 | annotation not available | annotation not available | 0.768 |
VV0765 | ispG | VV93_v1c07110 | VV93_v1c07120 | annotation not available | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family | 0.930 |
VV0768 | VV0765 | VV93_v1c07140 | VV93_v1c07110 | annotation not available | annotation not available | 0.770 |
VV0768 | bamA | VV93_v1c07140 | VV93_v1c22680 | annotation not available | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.534 |
VV0768 | bamB | VV93_v1c07140 | VV93_v1c07150 | annotation not available | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.988 |
VV0768 | bamE | VV93_v1c07140 | VV93_v1c07620 | annotation not available | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.420 |
VV0768 | engA | VV93_v1c07140 | VV93_v1c07160 | annotation not available | GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis | 0.894 |
VV0768 | hisS | VV93_v1c07140 | VV93_v1c07130 | annotation not available | annotation not available | 0.968 |
VV0768 | ispG | VV93_v1c07140 | VV93_v1c07120 | annotation not available | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family | 0.904 |
bamA | VV0768 | VV93_v1c22680 | VV93_v1c07140 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | annotation not available | 0.534 |
bamA | bamB | VV93_v1c22680 | VV93_v1c07150 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.984 |
bamA | bamC | VV93_v1c22680 | VV93_v1c22050 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Outer membrane protein assembly factor BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.962 |
bamA | bamD | VV93_v1c22680 | VV93_v1c06480 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.990 |
bamA | bamE | VV93_v1c22680 | VV93_v1c07620 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | 0.970 |
bamA | surA | VV93_v1c22680 | VV93_v1c04470 | Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation | 0.932 |
bamB | VV0765 | VV93_v1c07150 | VV93_v1c07110 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | annotation not available | 0.772 |
bamB | VV0768 | VV93_v1c07150 | VV93_v1c07140 | Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane | annotation not available | 0.988 |
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