STRINGSTRING
VV0790 protein (Vibrio vulnificus) - STRING interaction network
"VV0790" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV0790annotation not available (196 aa)    
Predicted Functional Partners:
VV0791
annotation not available (375 aa)
 
          0.970
VV0793
annotation not available (251 aa)
 
          0.953
VV0792
annotation not available (184 aa)
 
          0.947
VV0794
annotation not available (145 aa)
 
          0.895
VV0795
annotation not available (580 aa)
 
          0.737
VVA0319
annotation not available (242 aa)
   
          0.556
VV0641
annotation not available (1512 aa)
              0.453
gltB
annotation not available (1487 aa)
              0.453
VV0789
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (328 aa)
     
      0.434
VV2888
annotation not available (203 aa)
   
          0.423
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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