Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VV0902 | VV0903 | VV93_v1c08390 | VV93_v1c08400 | annotation not available | annotation not available | 0.760 |
| VV0902 | mrdA | VV93_v1c08390 | VV93_v1c08430 | annotation not available | Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily | 0.899 |
| VV0902 | mreB | VV93_v1c08390 | VV93_v1c26570 | annotation not available | annotation not available | 0.530 |
| VV0902 | rlmH | VV93_v1c08390 | VV93_v1c08440 | annotation not available | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family | 0.524 |
| VV0902 | rlpA | VV93_v1c08390 | VV93_v1c08410 | annotation not available | Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.582 |
| VV0902 | rodA | VV93_v1c08390 | VV93_v1c08420 | annotation not available | Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily | 0.893 |
| VV0902 | rsfS | VV93_v1c08390 | VV93_v1c08450 | annotation not available | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation | 0.494 |
| VV0903 | VV0902 | VV93_v1c08400 | VV93_v1c08390 | annotation not available | annotation not available | 0.760 |
| VV0903 | ftsI | VV93_v1c08400 | VV93_v1c05510 | annotation not available | Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily | 0.400 |
| VV0903 | mrdA | VV93_v1c08400 | VV93_v1c08430 | annotation not available | Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily | 0.857 |
| VV0903 | mreC | VV93_v1c08400 | VV93_v1c26560 | annotation not available | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape | 0.417 |
| VV0903 | rlmH | VV93_v1c08400 | VV93_v1c08440 | annotation not available | Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family | 0.594 |
| VV0903 | rlpA | VV93_v1c08400 | VV93_v1c08410 | annotation not available | Endolytic peptidoglycan transglycosylase RlpA; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.665 |
| VV0903 | rodA | VV93_v1c08400 | VV93_v1c08420 | annotation not available | Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily | 0.841 |
| VV0903 | rsfS | VV93_v1c08400 | VV93_v1c08450 | annotation not available | Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation | 0.526 |
| VV2756 | ftsI | VV93_v1c24680 | VV93_v1c05510 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) | Peptidoglycan D,D-transpeptidase FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily | 0.831 |
| VV2756 | mrdA | VV93_v1c24680 | VV93_v1c08430 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) | Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily | 0.829 |
| VV2756 | mreB | VV93_v1c24680 | VV93_v1c26570 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) | annotation not available | 0.420 |
| VV2756 | mreC | VV93_v1c24680 | VV93_v1c26560 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) | Cell shape-determining protein MreC; Involved in formation and maintenance of cell shape | 0.516 |
| VV2756 | rodA | VV93_v1c24680 | VV93_v1c08420 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) | Peptidoglycan glycosyltransferase MrdB; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily | 0.721 |
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