Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIL69964.1 | rluF | VV93_v1c08700 | VV93_v1c08690 | Smr domain protein. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.587 |
AIL71122.1 | rlmL | VV93_v1c20440 | VV93_v1c15290 | Exonuclease III. | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.486 |
AIL71122.1 | rluF | VV93_v1c20440 | VV93_v1c08690 | Exonuclease III. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.608 |
cmk | engA | VV93_v1c12150 | VV93_v1c07160 | Cytidylate kinase. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.985 |
cmk | rluF | VV93_v1c12150 | VV93_v1c08690 | Cytidylate kinase. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.663 |
engA | cmk | VV93_v1c07160 | VV93_v1c12150 | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | Cytidylate kinase. | 0.985 |
engA | rlmL | VV93_v1c07160 | VV93_v1c15290 | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.439 |
engA | rluF | VV93_v1c07160 | VV93_v1c08690 | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.640 |
rlmL | AIL71122.1 | VV93_v1c15290 | VV93_v1c20440 | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | Exonuclease III. | 0.486 |
rlmL | engA | VV93_v1c15290 | VV93_v1c07160 | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.439 |
rlmL | rluF | VV93_v1c15290 | VV93_v1c08690 | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 0.589 |
rluF | AIL69964.1 | VV93_v1c08690 | VV93_v1c08700 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Smr domain protein. | 0.587 |
rluF | AIL71122.1 | VV93_v1c08690 | VV93_v1c20440 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Exonuclease III. | 0.608 |
rluF | cmk | VV93_v1c08690 | VV93_v1c12150 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | Cytidylate kinase. | 0.663 |
rluF | engA | VV93_v1c08690 | VV93_v1c07160 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.640 |
rluF | rlmL | VV93_v1c08690 | VV93_v1c15290 | 23S rRNA pseudouridine2604 synthase; Belongs to the pseudouridine synthase RsuA family. | 23S rRNA m(2)G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.589 |