VV1009 protein (Vibrio vulnificus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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textmining

co-expression

protein homology

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[Homology]

Score

VV1009

annotation not available (530 aa)

Predicted Functional Partners:

VV2526

0.652

kefB

0.648

nagA

0.621

VV1010

0.613

VVA0010

0.483

asnB

0.480

Your Current Organism:

Vibrio vulnificus

NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
VV1009	VV1010	VV93_v1c09320	VV93_v1c09330	annotation not available	annotation not available	0.613
VV1009	VV2526	VV93_v1c09320	VV93_v1c22470	annotation not available	annotation not available	0.652
VV1009	VVA0010	VV93_v1c09320	VV93_v1c30210	annotation not available	annotation not available	0.483
VV1009	asnB	VV93_v1c09320	VV93_v1c09310	annotation not available	annotation not available	0.480
VV1009	kefB	VV93_v1c09320	VV93_v1c27710	annotation not available	Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport	0.648
VV1009	nagA	VV93_v1c09320	VV93_v1c09340	annotation not available	annotation not available	0.621
VV1010	VV1009	VV93_v1c09330	VV93_v1c09320	annotation not available	annotation not available	0.613
VV1010	asnB	VV93_v1c09330	VV93_v1c09310	annotation not available	annotation not available	0.410
VV1010	nagA	VV93_v1c09330	VV93_v1c09340	annotation not available	annotation not available	0.939
VV2526	VV1009	VV93_v1c22470	VV93_v1c09320	annotation not available	annotation not available	0.652
VVA0010	VV1009	VV93_v1c30210	VV93_v1c09320	annotation not available	annotation not available	0.483
asnB	VV1009	VV93_v1c09310	VV93_v1c09320	annotation not available	annotation not available	0.480
asnB	VV1010	VV93_v1c09310	VV93_v1c09330	annotation not available	annotation not available	0.410
kefB	VV1009	VV93_v1c27710	VV93_v1c09320	Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport	annotation not available	0.648
nagA	VV1009	VV93_v1c09340	VV93_v1c09320	annotation not available	annotation not available	0.621
nagA	VV1010	VV93_v1c09340	VV93_v1c09330	annotation not available	annotation not available	0.939

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Fusion

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