Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV1017 | VV1018 | VV93_v1c09400 | VV93_v1c09410 | annotation not available | annotation not available | 0.555 |
VV1017 | fldA | VV93_v1c09400 | VV93_v1c09390 | annotation not available | Flavodoxin; Low-potential electron donor to a number of redox enzymes | 0.778 |
VV1017 | seqA | VV93_v1c09400 | VV93_v1c09420 | annotation not available | Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated | 0.603 |
VV1018 | VV1017 | VV93_v1c09410 | VV93_v1c09400 | annotation not available | annotation not available | 0.555 |
VV1018 | fldA | VV93_v1c09410 | VV93_v1c09390 | annotation not available | Flavodoxin; Low-potential electron donor to a number of redox enzymes | 0.513 |
VV1018 | seqA | VV93_v1c09410 | VV93_v1c09420 | annotation not available | Negative modulator of initiation of replication; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated | 0.654 |
VVA0514 | dnaG | VV93_v1c35210 | VV93_v1c05040 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication; Belongs to the DnaG primase family | 0.509 |
VVA0514 | fldA | VV93_v1c35210 | VV93_v1c09390 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | Flavodoxin; Low-potential electron donor to a number of redox enzymes | 0.468 |
VVA0514 | gltB | VV93_v1c35210 | VV93_v1c05780 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | annotation not available | 0.753 |
VVA0514 | hemE | VV93_v1c35210 | VV93_v1c28700 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III | 0.736 |
VVA0514 | metH | VV93_v1c35210 | VV93_v1c26820 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate (By similarity) | 0.538 |
VVA0514 | napF | VV93_v1c35210 | VV93_v1c41170 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | annotation not available | 0.843 |
dnaG | VVA0514 | VV93_v1c05040 | VV93_v1c35210 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication; Belongs to the DnaG primase family | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | 0.509 |
dnaG | fldA | VV93_v1c05040 | VV93_v1c09390 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication; Belongs to the DnaG primase family | Flavodoxin; Low-potential electron donor to a number of redox enzymes | 0.530 |
dnaG | gltB | VV93_v1c05040 | VV93_v1c05780 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication; Belongs to the DnaG primase family | annotation not available | 0.462 |
fldA | VV1017 | VV93_v1c09390 | VV93_v1c09400 | Flavodoxin; Low-potential electron donor to a number of redox enzymes | annotation not available | 0.778 |
fldA | VV1018 | VV93_v1c09390 | VV93_v1c09410 | Flavodoxin; Low-potential electron donor to a number of redox enzymes | annotation not available | 0.513 |
fldA | VVA0514 | VV93_v1c09390 | VV93_v1c35210 | Flavodoxin; Low-potential electron donor to a number of redox enzymes | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family | 0.468 |
fldA | dnaG | VV93_v1c09390 | VV93_v1c05040 | Flavodoxin; Low-potential electron donor to a number of redox enzymes | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication; Belongs to the DnaG primase family | 0.530 |
fldA | fur | VV93_v1c09390 | VV93_v1c09370 | Flavodoxin; Low-potential electron donor to a number of redox enzymes | annotation not available | 0.628 |
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