STRINGSTRING
VV1025 protein (Vibrio vulnificus) - STRING interaction network
"VV1025" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1025annotation not available (252 aa)    
Predicted Functional Partners:
VV1648
annotation not available (222 aa)
   
          0.718
VVA0808
annotation not available (293 aa)
   
          0.660
VV3005
annotation not available (179 aa)
 
        0.647
VV1450
annotation not available (420 aa)
   
          0.641
VVA0818
annotation not available (145 aa)
   
          0.632
VV2359
annotation not available (682 aa)
     
        0.619
VVA0400
annotation not available (81 aa)
   
          0.618
VVA0413
annotation not available (201 aa)
   
          0.616
VVA0339
annotation not available (115 aa)
   
          0.615
VV1026
annotation not available (252 aa)
              0.603
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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