STRINGSTRING
VV1050 protein (Vibrio vulnificus) - STRING interaction network
"VV1050" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1050annotation not available (101 aa)    
Predicted Functional Partners:
VV0233
annotation not available (156 aa)
   
          0.784
VVA0786
annotation not available (124 aa)
   
          0.783
VVA0415
annotation not available (199 aa)
   
          0.783
VVA0784
annotation not available (191 aa)
   
          0.779
VV2018
annotation not available (119 aa)
   
          0.779
VV0048
annotation not available (314 aa)
   
          0.779
VVA0353
annotation not available (489 aa)
   
          0.778
VV2915
annotation not available (258 aa)
   
          0.776
VV0023
annotation not available (86 aa)
   
          0.776
luxU
Phosphorelay protein LuxU; Phosphorelay protein which receives a sensory signal from a sensor kinase and transmit it to LuxO. At low cell density, a phosphoryl group is transferred from the sensor kinase, probably on His-56 and this phosphoryl group is further transferred to LuxO (115 aa)
   
          0.775
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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