STRINGSTRING
VV1051 protein (Vibrio vulnificus) - STRING interaction network
"VV1051" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1051annotation not available (184 aa)    
Predicted Functional Partners:
VV1052
annotation not available (284 aa)
              0.888
VV1049
annotation not available (233 aa)
   
        0.748
VV1048
annotation not available (639 aa)
 
        0.737
VV1050
annotation not available (101 aa)
              0.709
VV1053
annotation not available (565 aa)
 
   
  0.685
rnd
Ribonuclease D; Exonuclease involved in the 3’ processing of various precursor tRNAs. Initiates hydrolysis at the 3’-terminus of an RNA molecule and releases 5’-mononucleotides; Belongs to the RNase D family (390 aa)
 
        0.649
VV1236
annotation not available (959 aa)
     
 
  0.503
VVA0550
annotation not available (559 aa)
     
 
  0.500
AIL72312.1
annotation not available (632 aa)
     
 
  0.500
VV1442
annotation not available (553 aa)
     
 
  0.500
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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