STRINGSTRING
dctD protein (Vibrio vulnificus) - STRING interaction network
"dctD" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctDannotation not available (446 aa)    
Predicted Functional Partners:
aauS
annotation not available (595 aa)
  0.986
VVA1649
annotation not available (603 aa)
  0.897
VVA1650
annotation not available (409 aa)
    
   
 
0.833
VVA1479
annotation not available (458 aa)
    
   
 
0.814
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (487 aa)
 
     
  0.765
glnL
annotation not available (348 aa)
 
  0.653
VV1102
annotation not available (54 aa)
              0.599
VV1603
annotation not available (539 aa)
 
 
  0.493
VVA0716
annotation not available (787 aa)
 
  0.491
VVA0612
annotation not available (519 aa)
     
 
  0.420
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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