Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV0427 | VV1148 | VV93_v1c03940 | VV93_v1c10660 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine | annotation not available | 0.985 |
VV1148 | VV0427 | VV93_v1c10660 | VV93_v1c03940 | annotation not available | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine | 0.985 |
VV1148 | VV1150 | VV93_v1c10660 | VV93_v1c10680 | annotation not available | annotation not available | 0.891 |
VV1148 | VV1285 | VV93_v1c10660 | VV93_v1c12030 | annotation not available | annotation not available | 0.450 |
VV1148 | VV3129 | VV93_v1c10660 | VV93_v1c28470 | annotation not available | annotation not available | 0.474 |
VV1148 | VVA0652 | VV93_v1c10660 | VV93_v1c36530 | annotation not available | annotation not available | 0.451 |
VV1148 | VVA1534 | VV93_v1c10660 | VV93_v1c44340 | annotation not available | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine | 0.987 |
VV1148 | btuD | VV93_v1c10660 | VV93_v1c13910 | annotation not available | Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system | 0.450 |
VV1148 | def1 | VV93_v1c10660 | VV93_v1c42470 | annotation not available | Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.553 |
VV1148 | def2 | VV93_v1c10660 | VV93_v1c29470 | annotation not available | Peptide deformylase 2; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | 0.553 |
VV1148 | guaA | VV93_v1c10660 | VV93_v1c07220 | annotation not available | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.595 |
VV1150 | VV1148 | VV93_v1c10680 | VV93_v1c10660 | annotation not available | annotation not available | 0.891 |
VV1285 | VV1148 | VV93_v1c12030 | VV93_v1c10660 | annotation not available | annotation not available | 0.450 |
VV3129 | VV1148 | VV93_v1c28470 | VV93_v1c10660 | annotation not available | annotation not available | 0.474 |
VV3129 | guaA | VV93_v1c28470 | VV93_v1c07220 | annotation not available | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP | 0.508 |
VVA0652 | VV1148 | VV93_v1c36530 | VV93_v1c10660 | annotation not available | annotation not available | 0.451 |
VVA1534 | VV1148 | VV93_v1c44340 | VV93_v1c10660 | Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine | annotation not available | 0.987 |
btuD | VV1148 | VV93_v1c13910 | VV93_v1c10660 | Vitamin B12 import ATP-binding protein BtuD; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system | annotation not available | 0.450 |
def1 | VV1148 | VV93_v1c42470 | VV93_v1c10660 | Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | annotation not available | 0.553 |
def2 | VV1148 | VV93_v1c29470 | VV93_v1c10660 | Peptide deformylase 2; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions | annotation not available | 0.553 |
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