STRINGSTRING
oppF protein (Vibrio vulnificus) - STRING interaction network
"oppF" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppFannotation not available (331 aa)    
Predicted Functional Partners:
oppC
annotation not available (302 aa)
  0.994
oppD
annotation not available (323 aa)
 
0.991
oppB
annotation not available (306 aa)
  0.991
oppA
annotation not available (543 aa)
  0.989
VV1310
annotation not available (288 aa)
 
0.948
VV0254
annotation not available (289 aa)
 
0.948
VV1311
annotation not available (276 aa)
   
   
 
0.904
VV0255
annotation not available (279 aa)
   
   
 
0.904
VV0046
annotation not available (312 aa)
 
  0.862
VVA1258
annotation not available (542 aa)
 
   
0.813
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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