STRINGSTRING
VV1240 protein (Vibrio vulnificus) - STRING interaction network
"VV1240" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1240annotation not available (302 aa)    
Predicted Functional Partners:
VV1447
annotation not available (182 aa)
   
          0.660
VV2366
annotation not available (255 aa)
   
          0.656
ompU
annotation not available (340 aa)
   
 
  0.632
VV2373
annotation not available (464 aa)
   
          0.603
VV1443
annotation not available (170 aa)
   
          0.603
VV2950
annotation not available (486 aa)
   
     
  0.600
VVA0890
annotation not available (178 aa)
   
          0.592
VV1648
annotation not available (222 aa)
   
          0.590
VVA0808
annotation not available (293 aa)
   
          0.585
VV2594
annotation not available (189 aa)
   
          0.585
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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