Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AIL69466.1 | rplD | VV93_v1c03670 | VV93_v1c03470 | annotation not available | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | 0.995 |
| AIL69466.1 | rplM | VV93_v1c03670 | VV93_v1c05350 | annotation not available | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | 0.974 |
| AIL69466.1 | rplQ | VV93_v1c03670 | VV93_v1c03720 | annotation not available | annotation not available | 0.994 |
| AIL69466.1 | rplU | VV93_v1c03670 | VV93_v1c04370 | annotation not available | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 0.983 |
| AIL69466.1 | rpmF | VV93_v1c03670 | VV93_v1c11880 | annotation not available | annotation not available | 0.993 |
| AIL69466.1 | rpmG | VV93_v1c03670 | VV93_v1c02790 | annotation not available | annotation not available | 0.985 |
| AIL69466.1 | rpmI | VV93_v1c03670 | VV93_v1c17030 | annotation not available | annotation not available | 0.978 |
| AIL69466.1 | rpsF | VV93_v1c03670 | VV93_v1c27130 | annotation not available | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA | 0.970 |
| AIL69466.1 | rpsN | VV93_v1c03670 | VV93_v1c03590 | annotation not available | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.996 |
| AIL69466.1 | rpsP | VV93_v1c03670 | VV93_v1c24990 | annotation not available | annotation not available | 0.990 |
| rplD | AIL69466.1 | VV93_v1c03470 | VV93_v1c03670 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.995 |
| rplD | rplM | VV93_v1c03470 | VV93_v1c05350 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly | 0.997 |
| rplD | rplQ | VV93_v1c03470 | VV93_v1c03720 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.994 |
| rplD | rplU | VV93_v1c03470 | VV93_v1c04370 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 | 0.991 |
| rplD | rpmF | VV93_v1c03470 | VV93_v1c11880 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.987 |
| rplD | rpmG | VV93_v1c03470 | VV93_v1c02790 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.976 |
| rplD | rpmI | VV93_v1c03470 | VV93_v1c17030 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.977 |
| rplD | rpsF | VV93_v1c03470 | VV93_v1c27130 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA | 0.993 |
| rplD | rpsN | VV93_v1c03470 | VV93_v1c03590 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | 30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site | 0.997 |
| rplD | rpsP | VV93_v1c03470 | VV93_v1c24990 | 50S ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5’-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome | annotation not available | 0.990 |
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