Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VV1232 | VV1295 | VV93_v1c11490 | VV93_v1c12110 | annotation not available | annotation not available | 0.559 |
VV1232 | dnaN | VV93_v1c11490 | VV93_v1c00020 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.727 |
VV1232 | lexA | VV93_v1c11490 | VV93_v1c01110 | annotation not available | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair | 0.590 |
VV1232 | polA | VV93_v1c11490 | VV93_v1c01730 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.857 |
VV1232 | recA | VV93_v1c11490 | VV93_v1c25160 | annotation not available | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.575 |
VV1295 | VV1232 | VV93_v1c12110 | VV93_v1c11490 | annotation not available | annotation not available | 0.559 |
VV1295 | VV1296 | VV93_v1c12110 | VV93_v1c12120 | annotation not available | annotation not available | 0.979 |
VV1295 | VV1297 | VV93_v1c12110 | VV93_v1c12130 | annotation not available | annotation not available | 0.533 |
VV1295 | VVA0035 | VV93_v1c12110 | VV93_v1c30430 | annotation not available | annotation not available | 0.562 |
VV1295 | VVA1111 | VV93_v1c12110 | VV93_v1c40510 | annotation not available | annotation not available | 0.544 |
VV1295 | dnaE2 | VV93_v1c12110 | VV93_v1c12100 | annotation not available | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase | 0.987 |
VV1295 | dnaN | VV93_v1c12110 | VV93_v1c00020 | annotation not available | Beta sliding clamp; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as [...] | 0.623 |
VV1295 | lexA | VV93_v1c12110 | VV93_v1c01110 | annotation not available | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair | 0.779 |
VV1295 | polA | VV93_v1c12110 | VV93_v1c01730 | annotation not available | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity | 0.766 |
VV1295 | recA | VV93_v1c12110 | VV93_v1c25160 | annotation not available | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage | 0.600 |
VV1296 | VV1295 | VV93_v1c12120 | VV93_v1c12110 | annotation not available | annotation not available | 0.979 |
VV1296 | VV1297 | VV93_v1c12120 | VV93_v1c12130 | annotation not available | annotation not available | 0.533 |
VV1296 | VVA1111 | VV93_v1c12120 | VV93_v1c40510 | annotation not available | annotation not available | 0.509 |
VV1296 | dnaE2 | VV93_v1c12120 | VV93_v1c12100 | annotation not available | Error-prone DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase | 0.974 |
VV1296 | lexA | VV93_v1c12120 | VV93_v1c01110 | annotation not available | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair | 0.664 |
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