STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIL70325.1Leucine-responsive transcriptional regulator. (164 aa)    
Predicted Functional Partners:
AIL70324.1
Alanine dehydrogenase; Belongs to the AlaDH/PNT family.
     
 0.785
ftsK
Cell division protein FtsK.
     
 0.759
iscR
Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.
     
 0.627
AIL72080.1
Translation elongation factor.
      
 0.524
AIL72891.1
Aromatic amino acid aminotransferase.
  
  
 0.515
AIL70375.1
ABC transporter permease.
     
 0.510
AIL71753.1
UTP-glucose-1-phosphate uridylyltransferase.
      
 0.504
AIL72466.1
Transcriptional regulator.
      
 0.504
AIL71161.1
Methyl-accepting chemotaxis protein.
      
 0.502
AIL72501.1
Methyl-accepting chemotaxis protein.
      
 0.502
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCRC:12905, CCUG 13448, CCUG 16394, CIP 75.4, CIP:75.04, DSM 10143, IFO 15645, JCM 3725, LMG 13545, LMG:13545, NBRC 15645, NCIMB 2046, NCTC 13647, V. vulnificus, strain 324
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