STRINGSTRING
VV1408 protein (Vibrio vulnificus) - STRING interaction network
"VV1408" - annotation not available in Vibrio vulnificus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VV1408annotation not available (207 aa)    
Predicted Functional Partners:
VV1411
annotation not available (566 aa)
 
          0.969
VV1412
annotation not available (381 aa)
 
          0.946
VV1410
annotation not available (216 aa)
 
        0.923
VV2308
annotation not available (225 aa)
 
        0.739
VV1407
annotation not available (509 aa)
              0.566
VV1413
annotation not available (148 aa)
 
          0.550
VV2359
annotation not available (682 aa)
         
  0.453
VV0861
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (368 aa)
         
  0.419
glpQ
annotation not available (352 aa)
     
 
  0.414
VV1507
annotation not available (235 aa)
     
 
  0.414
Your Current Organism:
Vibrio vulnificus
NCBI taxonomy Id: 672
Other names: ATCC 27562, BCRC 12905, Beneckea vulnifica, CAIM 610, CCRC 12905, CCUG 13448, CCUG 16394, CIP 75.4, DSM 10143, IFO 15645, JCM 3725, LMG 13545, NBRC 15645, V. vulnificus, Vibrio vulnificus, strain 324
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